Target prediction tools

mirDIP

Institution: Jurisica Lab, Krembil Research Institute - the University Health Network, Toronto, Canada. Last modified June 25, 2021. (Version 5.0.2.3, Database version 5.0.2.2) Authors: Tomas Tokar, Chiara Pastrello, Elize A Shirdel, Andrea E M Rossos, Mark Abovsky, Anne-Christin Hauschild, Max Kotlyar, Mike Tsay, Richard Lu, Gitta Ekaputeri, Dylan Bethune-Waddell, Zuhaib Ahmed, Wing Xie, Tak W Mak, Igor Jurisica

Tokar et al. Nucleic Acids Res. 2018, Shirdel et al. Plos One. 2011

multiMiR
Ru et al. Nucleic Acids Res. 2014

BCmicrO
Yue et al. BMC Genomics 2012

CoMeTa
Gennarino et al. Genome Res 2012

Cupid
Chiu et al. Genome Res 2015

DIANA-microT-CDS
Paraskevopoulou et al. Nucl Acids Res 2013

ElMMo3
Gaidatzis et al. BMC Bioinform 2007

GenMir++
Huang et al. Nat Methods 2007

MAMI
0

MBStar
Bandyopadhyay et al. Sci Rep 2015

MicroCosm
Griffiths-Jones et al. Nucl Acids Res 2008

miR2Disease
Jiang et al. Nucleic Acids Res 2009

MirAncesTar
Leclercq et al. Nucleic Acids Res 2017

mirBase
Kozomara et al. Nucleic Acids Res 2014

miRanda
John et al. PLoS Biol. 2004

miRBridge
Tsang et al. Mol Cell 2010

miRcode
Jeggari et al. Bioinformatics 2012

mirCoX
Giles et al. BMC Bioinformatics 2013

miRDsnp
Bruno et al. BMC Genomics 2012

miRDB
Chen et al. Nucleic Acids Res 2020

miRecords
Xiao et al. Nucleic Acids Res. 2009

MirGate
Andrés-León et al. Database 2015

miRMap
Vejnar et al. Nucleic Acids Res. 2012

MirSNP
Liu et al. BMC Genomics. 2012

MirTar
Hsu et al. BMC Bioinformatics. 2011

miRTar2GO
Ahadi et al.Nucleic Acids Res. 2017

miRTarBase
Huang et al. Nucleic Acids Res. 2020

mirWalk3
Sticht et al. PLoS One. 2018

Mirza-G
Gumienny et al. Nucleic Acids Res. 2015

MultiMiTar
Mitra R et al. PLoS One. 2011

PACCMIT
Marín et al. RNA. 2012

PharmacoMir
Rukov et al. Brief Bioinform. 2014

PITA
Kertesz et al. Nat Genet. 2007

PolymiRTS
Bhattacharya et al. Nucleic Acids Res. 2014

RNA22
Loher et al. Bioinformatics. 2012.

RPmirDP
Kyrollos et al. Sci Rep. 2020

StarBase
Li et al. Nucleic Acids Res. 2014

TargetRank
Nielsen et al. RNA. 2007

TargetScan
Agarwal et al. Elife. 2015

TargetSpy
Sturm et al. BMC Bioinformatics. 2010